CBIO LAB · DATA & CODE

Open tools for open discovery.

Reusable software, datasets, models, and interactive resources from our research.

Research resources

We aim to make our work reproducible and useful beyond the lab. Where available, each project links directly to its source code, datasets, documentation, and homepage.

01
Gene imputation · Pretrained model

stPainter

Pan-cancer pretraining for spatial gene-expression enhancement at single-cell resolution.

02
3D reconstruction · Generative model

DeepSpatial

Continuous-volume reconstruction for transcriptomic and proteomic spatial omics.

03
Histology-to-ST · One-step generation

DriftST

Generative inference of spatial transcriptomics directly from H&E pathology images.